Simulate Somatic Mutations in Cancer Genomes from Mutational Processes

Simulates somatic single base substitutions carried in cancer genomes. By only providing a human reference genome, substitutions that result from mutational processes operative in every cancer genome can be generated.


Reference manual

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0.17.3 by Nan Zhou, 4 years ago

Browse source code at

Authors: Nan Zhou

Documentation:   PDF Manual  

GPL-2 license

Imports Biostrings, BSgenome, GenomeInfoDb, GenomicRanges, IRanges, XVector

Depends on doParallel, utils, foreach, parallel, stats

Suggests BSgenome.Hsapiens.UCSC.hg38

See at CRAN