Read and Write 'GraphPad Prism' Files

Read and write 'GraphPad Prism' '.pzfx' files in R.


Build Status codecov CRAN_Status_Badge Read GraphPad Prism .pzfx files into R. It tries to understand different .pzfx table formats, e.g. replicates as subcolumns, or mean-sd-n as subcolumns etc and adds proper suffix to column names of the parsed output.

Installation

# Install from CRAN
install.packages("pzfx")

# Install development version from GitHub
devtools::install_github("Yue-Jiang/pzfx")

Usage

To list tables in a .pzfx file

library(pzfx)
pzfx_tables("/path/to/my/pzfx/file")

To read a specific table from a .pzfx file

df <- read_pzfx("/path/to/my/pzfx/file", 1) # read first table
df <- read_pzfx("/path/to/my/pzfx/file", "Table Name") # read table by name

To write a data frame or matrix to a .pzfx file

write_pzfx(df, "/path/to/my/pzfx/file")

News

CHANGES IN pzfx VERSION 0.1.0

NEW FEATURES

CHANGES IN pzfx VERSION 0.2.0

NEW FEATURES

  • Added support for writing pzfx files. See ?write_pzfx for details.

BUG FIXES

  • 'HugeTable' in '.pzfx' files is now respected. 'HugeTable' is used for tables with more than 104 data sets and/or 52 subcolumns by 'GraphPad Prism'.

Reference manual

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install.packages("pzfx")

0.2.0 by Yue Jiang, 3 months ago


https://github.com/Yue-Jiang/pzfx


Report a bug at https://github.com/Yue-Jiang/pzfx/issues


Browse source code at https://github.com/cran/pzfx


Authors: Yue Jiang [aut, cre]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports xml2

Suggests testthat, knitr, rmarkdown


See at CRAN