Gathering Metadata About Publications, Grants, Clinical Trials from 'PubMed' Database

A set of tools to extract bibliographic content from 'PubMed' database using 'NCBI' REST API < https://www.ncbi.nlm.nih.gov/home/develop/api/>. It includes functions to search, download, and convert 'PubMed' bibliographic records into data frames compatible with the 'bibliometrix' package. Features include programmatic query building, batch downloading by PMID, citation enrichment via 'NCBI' E-Link, and robust error handling with automatic retry logic.


Reference manual

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install.packages("pubmedR")

1.0.2 by Massimo Aria, 5 months ago


https://github.com/massimoaria/pubmedR


Report a bug at https://github.com/massimoaria/pubmedR/issues


Browse source code at https://github.com/cran/pubmedR


Authors: Massimo Aria [aut, cre] (ORCID:


Documentation:   PDF Manual  


GPL-3 license


Imports rentrez, XML

Suggests bibliometrix, knitr, rmarkdown, testthat, withr


Imported by bibliometrix.


See at CRAN