Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis'

Genomic data for the plant pathogen "Phytophthora infestans." It includes a variant file ('VCF'), a sequence file ('FASTA') and an annotation file ('GFF'). This package is intended to be used as example data for packages that work with genomic data.

pinfsc50

Phytophthora infestans supercontig_1.50

This package consists of genomic data for the plant pathogen Phytophthora infestans. It includes a variant file (vcf) sequence file (fasta) and an annotation file (gff). This package is intended to be used as example data for packages that work with genomic data.

Example dataset consisting of a vcf file, gff file and a fasta file for Phytophthora infestans supercontig_1.50.

To install use:

devtools::install_github(repo="knausb/pinfsc50")

To use:

library('pinfsc50')
?"pinfsc50"