Modelling Infectious Disease Superspreading from Contact Tracing Data

Comprehensive analytical tools are provided to characterize infectious disease superspreading from contact tracing surveillance data. The underlying theoretical frameworks of this toolkit include branching process with transmission heterogeneity (Lloyd-Smith et al. (2005) ), case cluster size distribution (Nishiura et al. (2012) , Blumberg et al. (2014) , and Kucharski and Althaus (2015) ), and decomposition of reproduction number (Zhao et al. (2022) ).


Reference manual

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install.packages("modelSSE")

0.1-3 by Shi Zhao, 3 years ago


Browse source code at https://github.com/cran/modelSSE


Authors: Shi Zhao [aut, cre]


Documentation:   PDF Manual  


GPL-3 license


Imports Delaporte


See at CRAN