Basic Biological Sequence Handling

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.


Reference manual

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install.packages("microseq")

2.1.7 by Lars Snipen, a year ago


https://github.com/larssnip/microseq


Browse source code at https://github.com/cran/microseq


Authors: Lars Snipen [aut, cre] , Kristian Hovde Liland [aut]


Documentation:   PDF Manual  


GPL-2 license


Imports Rcpp, data.table

Depends on tibble, stringr, dplyr, rlang

Suggests R.utils

Linking to Rcpp


Imported by Rsearch, strollur.

Depended on by micropan.


See at CRAN