Association Tests for Microbial Lineages on a Taxonomic Tree

A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).


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install.packages("miLineage")

2.1 by Zheng-Zheng Tang, a year ago


Browse source code at https://github.com/cran/miLineage


Authors: Zheng-Zheng Tang


Documentation:   PDF Manual  


GPL (>= 2) license


Depends on MASS, data.table, geepack


See at CRAN