Association Tests for Microbial Lineages on a Taxonomic Tree

A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).


Reference manual

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2.1 by Zheng-Zheng Tang, 4 years ago

Browse source code at

Authors: Zheng-Zheng Tang

Documentation:   PDF Manual  

GPL (>= 2) license

Depends on MASS, data.table, geepack

See at CRAN