Implementation for the ISA Abstract Model

ISA is a metadata framework to manage an increasingly diverse set of life science, environmental and biomedical experiments. In isatabr methods for reading, modifying and writing of files in the ISA-Tab format are implemented. It also contains methods for processing assay data.


isatabr

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isatabr is an R package for easily reading, modifying and writing files in the Investigation/Study/Assay (ISA) Abstract Model of the metadata framework using the ISA tab-delimited (TAB) format.

Installation

  • Install from CRAN:
install.packages("isatabr")
  • Install latest development version from GitHub (requires remotes package):
remotes::install_github("Biometris/isatabr", ref = "develop", dependencies = TRUE)

Reference manual

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install.packages("isatabr")

1.0.1 by Bart-Jan van Rossum, 4 years ago


https://github.com/Biometris/isatabr/


Report a bug at https://github.com/Biometris/isatabr/issues


Browse source code at https://github.com/cran/isatabr


Authors: Bart-Jan van Rossum [aut, cre] , Maikel Verouden [aut]


Documentation:   PDF Manual  


GPL-3 license


Depends on methods

Suggests tinytest, affy, Biobase, xcms, knitr, rmarkdown


See at CRAN