Training Datasets for iC10 Package

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.


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install.packages("iC10TrainingData")

1.3.1 by Oscar M. Rueda, a year ago


Browse source code at https://github.com/cran/iC10TrainingData


Authors: Oscar M Rueda and Jose Antonio Seoane Fernandez


Documentation:   PDF Manual  


GPL-3 license



Depended on by iC10.


See at CRAN