Significant Interval Discovery with Categorical Covariates

A method which uses the Cochran-Mantel-Haenszel test with significant pattern mining to detect intervals in binary genotype data which are significantly associated with a particular phenotype, while accounting for categorical covariates.


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install.packages("fastcmh")

0.2.7 by Dean Bodenham, 2 years ago


Browse source code at https://github.com/cran/fastcmh


Authors: Felipe Llinares Lopez , Dean Bodenham


Documentation:   PDF Manual  


GPL-2 | GPL-3 license


Imports Rcpp

Depends on bindata

Suggests testthat

Linking to Rcpp

System requirements: C++11


See at CRAN