Closed Testing with Globaltest for Pathway Analysis

A shortcut procedure is proposed to implement closed testing for large-scale multiple testings, especially with the global test. This shortcut is asymptotically equivalent to closed testing and post hoc. Users could detect any possible sets of features or pathways with family-wise error rate controlled. The global test is powerful to detect associations between a group of features and an outcome of interest.


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install.packages("ctgt")

1.0 by Ningning Xu, 7 months ago


Browse source code at https://github.com/cran/ctgt


Authors: Ningning Xu


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp

Linking to Rcpp, BH

System requirements: C++11


Depended on by newFocus.


See at CRAN