Bayesian Multivariate Analysis of Summary Statistics

Multivariate tool for analyzing genome-wide association study results in the form of univariate summary statistics. The goal of 'bmass' is to comprehensively test all possible multivariate models given the phenotypes and datasets provided. Multivariate models are determined by assigning each phenotype to being either Unassociated (U), Directly associated (D) or Indirectly associated (I) with the genetic variant of interest. Test results for each model are presented in the form of Bayes factors, thereby allowing direct comparisons between models. The underlying framework implemented here is based on the modeling developed in "A Unified Framework for Association Analysis with Multiple Related Phenotypes", M. Stephens (2013) .


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Reference manual

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install.packages("bmass")

1.0.3 by Michael Turchin, 7 months ago


https://github.com/mturchin20/bmass


Report a bug at https://github.com/mturchin20/bmass/issues


Browse source code at https://github.com/cran/bmass


Authors: Michael Turchin [aut, cre] , Matthew Stephens [aut] , Peter Carbonetto [ctb]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports utils, stats

Suggests testthat, knitr, rmarkdown


See at CRAN