Ribosome Profiling Data Analysis

Included here are babel routines for identifying unusual ribosome protected fragment counts given mRNA counts.


Package: babel

Version: 0.3-0 [2016-06-22] o nSD parameter, which is used to define outliers when computing the standard error of the between statistic, is now accessible to users.

Version: 0.2-6 [2014-04-23] o doBetween fold change fixed to have proper sign

Version: 0.2-5 [2014-01-08] o doBetween ... bug fixed

Version: 0.2-4 [2013-12-19] o Group label bug fixed

Version: 0.2-3 [2013-12-03] o First version submitted to CRAN

Reference manual

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0.3-0 by Adam B. Olshen, 3 years ago

Browse source code at https://github.com/cran/babel

Authors: Adam B. Olshen , Richard A. Olshen , Barry S. Taylor

Documentation:   PDF Manual  

LGPL (>= 2.1) license

Imports parallel

Depends on edgeR

Suggests R.rsp, R.devices, R.utils

See at CRAN