Functions to Compute Chemical and Chemical Reaction Similarity

Methods to compute chemical similarity between two or more reactions and molecules. Allows masking of chemical substructures for weighted similarity computations. Uses packages 'rCDK' and 'fingerprint' for cheminformatics functionality. Methods for reaction similarity and sub-structure masking are as described in: Giri et al. (2015) .


RxnSim

Methods to compute chemical similarity between two or more reactions and molecules. Depends upon 'rCDK' and 'fingerprint' for cheminformatics functionality.

Reference manual

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install.packages("RxnSim")

1.0.4 by Varun Giri, 3 years ago


Browse source code at https://github.com/cran/RxnSim


Authors: Varun Giri [aut, cre]


Documentation:   PDF Manual  


GPL-3 license


Imports methods, rJava, fingerprint, data.table, rcdk


See at CRAN