Assignment of Haplotypes Based on SNP Dosages in Diploids and Polyploids

Infer the genetic composition of individuals in terms of haplotype dosages for a haploblock, based on bi-allelic marker dosages, for any ploidy level. Reference: Voorrips and Tumino: PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data. Submitted to BMC Bioinformatics (2021).


Reference manual

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1.0.1 by Roeland E. Voorrips, 7 months ago

Browse source code at

Authors: Roeland E. Voorrips

Documentation:   PDF Manual  

GPL-2 license

Imports XML

Suggests knitr, rmarkdown

See at CRAN