Statistical Framework for Co-Mediators of Zero-Inflated Single-Cell Data

A causal mediation framework for single-cell data that incorporates two key features ('MedZIsc', pronounced Magics): (1) zero-inflation using beta regression and (2) overdispersed expression counts using negative binomial regression. This approach also includes a screening step based on penalized and marginal models to handle high-dimensionality. Full methodological details are available in our recent preprint by Ahn S et al. (2025) .


Reference manual

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install.packages("MedZIsc")

0.0.5 by Seungjun Ahn, 2 months ago


Browse source code at https://github.com/cran/MedZIsc


Authors: Seungjun Ahn [cre, aut] (ORCID: , Zhigang Li [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports MASS, betareg, glmnet

Suggests knitr, rmarkdown, testthat


See at CRAN