Learn Direct Interaction Networks

Learns direct microbe-microbe interaction networks using a Poisson multivariate-normal hierarchical model with an L1 penalized precision matrix. Optimization is carried out using an iterative conditional modes algorithm.


Reference manual

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1.0.1 by Surojit Biswas, 6 years ago

Browse source code at https://github.com/cran/MInt

Authors: Surojit Biswas , Meredith McDonald , Derek S. Lundberg , Jeffery L. Dangl , Vladimir Jojic

Documentation:   PDF Manual  

GPL-2 license

Depends on glasso, trust, MASS, testthat

Suggests knitr

See at CRAN