Learn Direct Interaction Networks

Learns direct microbe-microbe interaction networks using a Poisson multivariate-normal hierarchical model with an L1 penalized precision matrix. Optimization is carried out using an iterative conditional modes algorithm.


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install.packages("MInt")

1.0.1 by Surojit Biswas, 4 years ago


Browse source code at https://github.com/cran/MInt


Authors: Surojit Biswas , Meredith McDonald , Derek S. Lundberg , Jeffery L. Dangl , Vladimir Jojic


Documentation:   PDF Manual  


GPL-2 license


Depends on glasso, trust, MASS, testthat

Suggests knitr


See at CRAN