Mixed Model Association Test for GEne-Environment Interaction

Use a 'glmmkin' class object (GMMAT package) from the null model to perform generalized linear mixed model-based single-variant and variant set main effect tests, gene-environment interaction tests, and joint tests for association, as proposed in Wang et al. (2020) .


Reference manual

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1.0.1 by Han Chen, 2 months ago

Browse source code at https://github.com/cran/MAGEE

Authors: Xinyu Wang [aut] , Han Chen [aut, cre] , Duy Pham [aut]

Documentation:   PDF Manual  

GPL-3 license

Imports Rcpp, Matrix, parallel, MASS, SeqArray, SeqVarTools, foreach, GMMAT, CompQuadForm

Suggests doMC, testthat

Linking to Rcpp, RcppArmadillo

See at CRAN