Linkage Disequilibrium Corrected by the Structure and the Relatedness

Four measures of linkage disequilibrium are provided: the usual r^2 measure, the r^2_S measure (r^2 corrected by the structure sample), the r^2_V (r^2 corrected by the relatedness of genotyped individuals), the r^2_VS measure (r^2 corrected by both the relatedness of genotyped individuals and the structure of the sample).


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


1.3.3 by Aurélie Siberchicot, 2 months ago

Browse source code at

Authors: David Desrousseaux , Florian Sandron , Aurélie Siberchicot , Christine Cierco-Ayrolles and Brigitte Mangin

Documentation:   PDF Manual  

GPL (>= 2) license

Imports parallel

Suggests testthat

See at CRAN