Score Taxon-Level IgA Binding in IgA-Seq Experiments

Functions to calculate indices used to score immunoglobulin A (IgA) binding of bacteria in IgA sequencing (IgA-Seq) experiments. This includes the original Kau and Palm indices and more recent methods as described in Jackson et al. (2020) . Additionally the package contains a function to simulate IgA-Seq data and an example experimental data set for method testing.


Reference manual

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0.1.2 by Matthew Jackson, a year ago

Browse source code at

Authors: Matthew Jackson [aut, cre, cph]

Documentation:   PDF Manual  

GPL-3 license

Suggests knitr, markdown

See at CRAN