Integrated Methylation QTL Mapping and Allele-Specific Analysis

Performs mQTL (methylation quantitative-trait locus) mapping in bisulfite sequencing studies by fitting a binomial mixed model and then incorporating the allelic-specific methylation pattern. Based on Fan, Yue; Vilgalys, Tauras P.; Sun, Shiquan; Peng, Qinke; Tung, Jenny; Zhou, Xiang (2019) .


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("IMAGE")

1.0 by Michael Kleinsasser, a month ago


Report a bug at https://github.com/umich-biostatistics/IMAGE/issues


Browse source code at https://github.com/cran/IMAGE


Authors: Xiang Zhou [aut] , Shiquan Sun [aut] , Yue Fan [aut] , Michael Kleinsasser [cre]


Documentation:   PDF Manual  


GPL-2 license


Imports Rcpp, foreach, doParallel, parallel, Matrix

Linking to Rcpp, RcppArmadillo


See at CRAN