Finder of Rare Entities (FiRE)

The algorithm assigns rareness/ outlierness score to every sample in voluminous datasets. The algorithm makes multiple estimations of the proximity between a pair of samples, in low-dimensional spaces. To compute proximity, FiRE uses Sketching, a variant of locality sensitive hashing. For more details: Jindal, A., Gupta, P., Jayadeva and Sengupta, D., 2018. Discovery of rare cells from voluminous single cell expression data. Nature Communications, 9(1), p.4719. .


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Reference manual

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install.packages("FiRE")

1.0 by Prashant Gupta, 4 months ago


https://github.com/princethewinner/FiRE


Report a bug at https://github.com/princethewinner/FiRE/issues


Browse source code at https://github.com/cran/FiRE


Authors: Prashant Gupta [aut, cre] , Aashi Jindal [aut] , Jayadeva [aut] , Debarka Sengupta [aut]


Documentation:   PDF Manual  


GPL-3 license


Imports methods, Rcpp

Linking to Rcpp, BH


See at CRAN