Calls Copy Number Variants from Targeted Sequence Data

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.


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install.packages("ExomeDepth")

1.1.10 by Vincent Plagnol, 3 years ago


Browse source code at https://github.com/cran/ExomeDepth


Authors: Vincent Plagnol


Documentation:   PDF Manual  


GPL-3 license


Imports Biostrings, IRanges, Rsamtools, GenomicRanges, aod, VGAM, methods, GenomicAlignments

Suggests knitr


See at CRAN