Calls Copy Number Variants from Targeted Sequence Data

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.


Reference manual

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1.1.15 by Vincent Plagnol, a year ago

Browse source code at

Authors: Vincent Plagnol [aut, cre]

Documentation:   PDF Manual  

GPL-3 license

Imports Biostrings, IRanges, Rsamtools, GenomicRanges, aod, VGAM, methods, GenomicAlignments, dplyr, magrittr

Suggests knitr

See at CRAN