Tumor Clones Percentage Estimations

Includes R functions for the estimation of tumor clones percentages for both snp data and (whole) genome sequencing data. See Cheng, Y., Dai, J. Y., Paulson, T. G., Wang, X., Li, X., Reid, B. J., & Kooperberg, C. (2017). Quantification of multiple tumor clones using gene array and sequencing data. The Annals of Applied Statistics, 11(2), 967-991, for more details.


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install.packages("EstMix")

1.0.1 by Xuan You, 7 months ago


Browse source code at https://github.com/cran/EstMix


Authors: Xuan You <[email protected]> , Yichen Cheng <[email protected]>


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp, PSCBS

Linking to Rcpp, RcppArmadillo


See at CRAN