Bayesian Tensor Factorization Linked to External Data

BaTFLED is a machine learning algorithm designed to make predictions and determine interactions in data that varies along three independent modes. For example BaTFLED was developed to predict the growth of cell lines when treated with drugs at different doses. The first mode corresponds to cell lines and incorporates predictors such as cell line genomics and growth conditions. The second mode corresponds to drugs and incorporates predictors indicating known targets and structural features. The third mode corresponds to dose and there are no dose-specific predictors (although the algorithm is capable of including predictors for the third mode if present). See 'BaTFLED3D_vignette.rmd' for a simulated example.


Reference manual

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0.1.7 by Nathan Lazar, 2 months ago

Browse source code at

Authors: Nathan Lazar [aut, cre]

Documentation:   PDF Manual  

CC BY-NC-SA 4.0 license

Imports foreach, R6, iterators, rTensor, RColorBrewer

Suggests doMC, doParallel, knitr, rmarkdown

See at CRAN