A Driver Discovery Tool for Cancer Whole Genomes

A method for finding an enrichment of cancer simple somatic mutations (SNVs and Indels) in functional elements across the human genome. 'ActiveDriverWGS' detects coding and noncoding driver elements using whole genome sequencing data.


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Reference manual

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install.packages("ActiveDriverWGS")

1.0.1 by Helen Zhu, 6 months ago


Browse source code at https://github.com/cran/ActiveDriverWGS


Authors: Helen Zhu [aut, cre] , Juri Reimand [aut]


Documentation:   PDF Manual  


GPL-3 license


Imports BSgenome, BSgenome.Hsapiens.UCSC.hg19, Biostrings, GenomeInfoDb, GenomicRanges, IRanges, S4Vectors, plyr

Suggests knitr, testthat, rmarkdown


See at CRAN