Array Based CpG Region Analysis Pipeline

It aims to identify candidate genes that are “differentially methylated” between cases and controls. It applies Student’s t-test and delta beta analysis to identify candidate genes containing multiple “CpG sites”.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


0.9.0 by Abdulmonem Alsaleh, 10 months ago

Browse source code at

Authors: Abdulmonem Alsaleh [cre, aut], Robert Weeks [aut], Ian Morison [aut], RStudio [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports graphics, stats, utils

Suggests knitr, rmarkdown

System requirements: GNU make

See at CRAN