Analysis of ChIP-seq and other functional sequencing data [Kharchenko PV (2008)
A unix-flavored OS with R (>= 3.3.0) installed.
Since version 1.15.4 spp is available on CRAN and can be installed using the command
Alternatively you can use modtools to install spp:
require(devtools) devtools::install_github('hms-dbmi/spp', build_vignettes = FALSE)
download a .tar.gz containing the latest release and use the standard R installation command, e.g.:
R CMD INSTALL spp_1.13.tar.gz
Note: Since version 1.15.4 the Boost headers are incorporated and linked taking advantage of BH package to avoid problems due to non-standard Boost libraries installation.