Creates plots of p-values using single SNP and/or haplotype data.
Main features of the package include options to display a linkage
disequilibrium (LD) plot and the ability to plot multiple datasets
simultaneously. Plots can be created using global and/or individual
haplotype p-values along with single SNP p-values. Images are created as
either PDF/EPS files.
snp.plotter 0.3.1 - 2010-11-22
- Changed dependency back from GeneticsBase because GeneticsBase is not in the Bioconductor 2.7 release. The genetics package produces a obselete package warning; only the LD and genotype functions of the genetics package are used.
snp.plotter 0.4 - 2011-05-11
- Support for scaling SNP names and symbols added making it easier to draw diagrams with a greater number of SNPs.