Robust Clustering of Single Cell RNA-Seq Data

Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis from Magen 2019 .


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Reference manual

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install.packages("robustSingleCell")

0.1.1 by Meng Wang, 5 months ago


https://github.com/asmagen/robustSingleCell


Report a bug at https://github.com/asmagen/robustSingleCell/issues


Browse source code at https://github.com/cran/robustSingleCell


Authors: Assaf Magen [aut, cph] , Meng Wang [aut, cre] , Hao Chen [ctb]


Documentation:   PDF Manual  


Artistic-2.0 license


Imports utils, grDevices, graphics, Matrix, limma, biomaRt, dplyr, ggplot2, reshape2, GGally, ggrepel, RColorBrewer, gplots, ggpubr, cccd, rslurm, Rtsne, igraph, scales, RANN, Rcpp

Suggests GEOquery, knitr, rmarkdown, testthat

Linking to Rcpp


See at CRAN