Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data

Pareto front based statistical tool for detecting heterogeneity in gene sets and biological modules from time-course data. Details about this method are described in Gu, J., et al. (2017) : Phantom: investigating heterogeneous gene sets in time-course data.


Reference manual

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0.1.3 by Jinyan Chan, a year ago

Browse source code at

Authors: Jinghua Gu [aut, cre] , Xuan Wang [aut] , Jinayn Chan [aut, cre] , Nicole Baldwin [aut] , Jacob Turner [aut]

Documentation:   PDF Manual  

GPL-2 license

Imports Rcpp, NMF, MASS, RColorBrewer, gplots, qusage

Suggests knitr, rmarkdown

Linking to Rcpp, RcppArmadillo

See at CRAN