Bayesian analysis of haplotype association using Markov Chain Monte Carlo

The package BayHap performs simultaneous estimation of uncertain haplotype frequencies and association with haplotypes based on generalized linear models for quantitative, binary and survival traits. Bayesian statistics and Markov Chain Monte Carlo techniques are the theoretical framework for the methods of estimation included in this package. Prior values for model parameters can be included by the user. Convergence diagnostics and statistical and graphical analysis of the sampling output can be also carried out.


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Reference manual

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install.packages("BayHap")

1.0.1 by Raquel Iniesta, 6 years ago


Browse source code at https://github.com/cran/BayHap


Authors: Raquel Iniesta and Victor Moreno


Documentation:   PDF Manual  


GPL (>= 2) license


Depends on boa


See at CRAN